|
Functional category
|
N° genes
|
|---|
|
FPKM_CTRL CO441 > 5; 0 ≤ FPKM_CTRL CO354 < 0.5
|
FPKM_CTRL CO354 > 5; 0 ≤ FPKM_CTRL CO441 < 0.5
|
|---|
|
All defense-related genes
|
29
|
7
|
|
Cell wall
|
1
|
4
|
|
Resistance
|
5
|
1
|
|
Response to stress
|
12
|
2
|
|
Secondary metabolism
|
11
|
/
|
|
Cell component
|
9
|
2
|
|
Electron/energy
|
8
|
1
|
|
Metabolic process
|
90
|
17
|
|
Miscellanea
|
20
|
2
|
|
Photosynthesis
|
1
|
1
|
|
Proteolysis
|
4
|
2
|
|
Signal transduction
|
31
|
4
|
|
Transport
|
9
|
/
|
|
Unknown function
|
101
|
21
|
- The table shows the total number of genes whose basal expression is higher in the resistant CO441 or susceptible CO354 genotype within each category, considering the following filters: FPKM >5 in CO441 and 0 ≤ FPKM <0.5 in CO354, and FPKM > 5 in CO354 and 0 ≤ FPKM < 0.5 in CO441, respectively. Defense-related genes considered for the comparison are those functionally categorized as ‘cell wall’, ‘resistance’, ‘response to stress’ and ‘secondary metabolism’.
