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Table 1 Intra- and intergenomic comparisons of Microcebus murinus V1R subfamily diversity examined herein

From: The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms

Intragenomic

M. murinus 1

 

V1RI

 
 

CCS vs. draft genome1

V1RIX

 
 

CCS vs. draft genome1

M. murinus 2

V1RI

 
 

CCS vs. Sanger2

Intergenomic

M. murinus 1 vs. M. murinus 2

V1RI

 
 

CCS vs. CCS

 

draft genome1 vs. CCS

 

draft genome1 vs. Sanger2

V1RIX

 
 

CCS vs. CCS

 

draft genome1 vs. CCS

  1. CCS = PacBio Circular Consensus Sequencing. V1R subfamily nomenclature (V1RI and V1RIX) follows Hohenbrink et al. [30].
  2. 1V1R sequences mined by Young et al.[18].
  3. 2V1RI sequences originating from Sanger sequencing of cloned amplicons [29].
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BMC Genomics

ISSN: 1471-2164

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