Table 1 List of conditions and/or mutant strains represented in R. capsulatus samples
Module indexa | Strain | Growth phaseb | Growth conditionc | Description | Number of replicates |
|---|---|---|---|---|---|
1 (yellow) | cckA | ML | YPS 37°C | SB1003 cckA mutant | 1 |
2 (yellow) | SBRM1 | ML | YPS 37°C | SB1003 ctrA mutant | 3 |
3 (blue) | ALS1 | T | YPS 37°C | gtaI quorum sensing mutant | 1 |
4 (blue) | SB1003 | T | YPS 37°C | Wild type | 1 |
5 (blue) | ALS1 | ML | YPS 37°C | gtaI quorum sensing mutant | 1 |
6 (blue) | SB1003 | ML | YPS 30°C | Wild type | 1 |
7 (blue) | SB1003 | ML | YPS 37°C | Wild type | 7 |
8 (green) | ALS1 | ES | RCV 30°C | gtaI quorum sensing mutant | 1 |
9 (green) | SB1003 | ES | RCV 30°C | Wild type | 1 |
10 (green) | SLRK | ES | RCV 30°C | gtaR quorum sensing mutant | 1 |
11 (green) | SLRK | ML | RCV 30°C | gtaR quorum sensing mutant | 1 |
12 (green) | ALS1 | ML | RCV 30°C | gtaI quorum sensing mutant | 1 |
13 (green) | SB1003 | ML | RCV 30°C | Wild type | 1 |
14 (orange) | DE442 | ML | YPS 37°C | GTA overproducer | 1 |
15 (orange) | DE442 | T | YPS 37°C | GTA overproducer | 1 |
16 (orange) | DE442 | ES | YPS 37°C | GTA overproducer | 1 |
17 (orange) | DE442 | LS | YPS 37°C | GTA overproducer | 1 |
18 (red) | cckA | ES | YPS 37°C | SB1003 cckA mutant | 1 |
19 (red) | SBRM1 | ES | YPS 37°C | SB1003 ctrA mutant | 3 |
20 (red) | SB1003 | LS | YPS 37°C | Wild type | 2 |
21 (red) | SB1003 | ES | YPS 30°C | Wild type | 1 |
22 (red) | ALS1 | ES | YPS 37°C | gtaI quorum sensing mutant | 1 |
23 (red) | SB1003 | ES | YPS 37°C | Wild type | 7 |