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Table 3 The number of the SNP fragments which cover the certain range of the numbered of SNPs (before SIH) and the number of haplotype blocks which contain the certain range of the number of phased SNPs (after SIH)

From: Integrating dilution-based sequencing and population genotypes for single individual haplotyping

 

–10

11–20

21–50

51–100

101–200

201–

(A)

Before SIH

261,537

65,429

18,894

540

16

1

After SIH

28,631

10,503

11,186

3,998

923

72

(B)

Before SIH

291,495

92,104

49,092

3,652

192

8

After SIH

15,273

4,037

6,039

4,882

3,267

1,202

  1. (A) and (B) correspond to Kaper’s data and Duitama’s data, respectively. Note that a SNP can be contained in multiple SNP fragments and the halotype blocks do not overlap each other. The first row defines the range of the number of SNPs.