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Table 2 Identification of signaling pathways enriched in more than one cell line

From: Comprehensive analysis of β-catenin target genes in colorectal carcinoma cell lines with deregulated Wnt/β-catenin signaling

Treatment

Intersection

Enriched KEGG pathways

Biocarta pathways

β-catenin RNAi

DLD1/SW480

Endocytosis

mCalpain pathway

Insulin signaling pathway

CREB pathway

Lysosome

IGF1R pathway

FC gamma R mediated phagocytosis

Apoptosis

Regulation of actin cytoskeleton

Glycerolipid metabolism

Focal adhesion

Aldosterone regulated sodium reabsorption

DLD1/LS174T

PPAR signaling pathway

Metabolism of xenobiotics by cytochrome P450

Butanoate metabolism

SW480/LS174T

Complement and coagulation cascades

 

Histidine metabolism

Ether lipid metabolism

NOD like receptor signaling pathway

DLD1/SW480/LS174T

Steroid hormone biosynthesis

β-galactosidase RNAi

DLD1/SW480

Glycine serine and threonine metabolism

Renin angiotensin system

DLD1/LS174T

DNA replication

ATRBRCA pathway

Base excision repair

Mismatch repair

Homologous recombination

Cell cycle

Nucleotide excision repair

Pyrimidine metabolism

RNA polymerase

RNA degradation

Spliceosome

SW480/LS174T

Basal cell carcinoma

 

DLD1/SW480/LS174T

 
  1. Gene set enrichment analyses were performed after treatment of DLD1, SW480, and LS174T cells with β-catenin RNAi or β-galactosidase RNAi using the KEGG and the Biocarta pathway database, respectively. Pathways that were enriched in more than one cell line were identified using a Biovenn software package.