Table 3 proTRAC output and distribution of piRNAs from next-generation sequencing
Samples | proTRAC input | proTRAC output | Distribution of piRNAs | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Number of unique reads | Number of unique piRNAs | Repeat | Unannotated | Intron sense | Intron antisense | Exon sense | Exon antisense | snRNA | rRNA | miRNA | tRNA |
PGCs | 687544 | 92373 | 74337 | 14478 | 1961 | 866 | 524 | 121 | 50 | 22 | 13 | 1 |
Stage X | 350113 | 12124 | 10925 | 925 | 194 | 63 | 13 | 1 | 0 | 2 | 0 | 1 |
GSCs | 350647 | 4930 | 3116 | 1562 | 121 | 62 | 59 | 0 | 5 | 0 | 5 | 0 |
CEFs | 159803 | 642 | 31 | 360 | 17 | 2 | 122 | 20 | 1 | 2 | 0 | 87 |