RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock

Table 1 Novel ncRNAs detected by RNA-Seq plotted data

Id	Start	Stop	Strand	Length	Prediction
ReC 101	672255	672116	Minus	140 bp	ncRNA
ReC 102	1331946	1331792	Minus	155 bp	ncRNA
ReC 103	1674693	1674827	Plus	135 bp	Protein
ReC 104	1747454	1747598	Plus	145 bp	ncRNA
ReC 105	1748816	1748663	Minus	154 bp	ncRNA
ReC 106	1749213	1748896	Minus	318 bp	Protein
ReC 107	1832463	1832580	Plus	118 bp	ncRNA
ReC 108	1839511	1839637	Plus	127 bp	ncRNA
ReC 109	1932797	1932959	Plus	163 bp	ncRNA
ReC 110	2475589	2475733	Plus	145 bp	Protein
ReC 111	2546193	2546004	Minus	190 bp	ncRNA
ReC 112	2763999	2764196	Plus	198 bp	ncRNA
ReC 113	2940023	2939896	Minus	128 bp	ncRNA
ReC 114	3416634	3416858	Plus	225 bp	Protein
ReC 115	3620823	3620581	Minus	243 bp	Protein
ReC 116	3634855	3634540	Minus	316 bp	Protein
ReC 117	3719937	3719559	Minus	379 bp	Protein
ReC 118	3776471	3776654	Plus	184 bp	ncRNA

Table 1. Novel ncRNAs detected using the RNA-Seq plotted data. Eighteen transcribed regions were identified as novel ncRNAs or non-annotated proteins using Artemis (Graph, Add User Plot). The coordinates, strands and lengths of the ncRNAs and non-annotated proteins are shown (see the Methods section for more details).

ISSN: 1471-2164