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Figure 3 | BMC Genomics

Figure 3

From: Unusual genome complexity in Lactobacillus salivarius JCM1046

Figure 3

A comparison eight repA -type megaplasmids of L. salivarius. A BLAST atlas diagram of eight repA-type megaplasmids of L. salivarius was generated using BLAST Ring Image Generator (BRIG) [51], using pMP1046A as the reference replicon (the outer dark green ring). Working inwards from pMP1046A, the next seven rings represent query repA-type plasmids of L. salivarius strains: cp400, pMP20555, pMP118, pHN3, pMPGJ-24, pNA2, pLS51A. When the completed or circularised version of the repA-type megaplasmid was not available (L. salivarius cp400 [18] and L. salivarius DSM20555), all available sequence data for each strain was mapped to pMP1046A. Regions of diversity between the repA-type megaplasmids are indicated by the labels R1-R9. The GC% of pMP1046A was projected onto the mapped plasmid sequences (black ring) and sits outside the molecular clock surrounding the figure legend at the centre of the figure.

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