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Table 2 Summary of QTLs detected in Linkage Analyses studies

From: Identification of QTLs for behavioral reactivity to social separation and humans in sheep using the OvineSNP50 BeadChip

OAR

Trait

Signifi-cance1

Level

Position2(Mb)

Confidence Interval

Average QTL Effect3

5

FACTOR1

**

CW

93.8

92.0 - 95.3

0.26

5

ISO_HBLEAT

**

CW

96.8

92.8 – 97.3

0.22

5

CT1-HBLEAT

*

GW

93.7

92.0 – 95.4

0.25

5

IBT-HBLEAT

*

GW

52.6

47.0 – 55.0

0.22

6

FACTOR2

**

CW

111.7

111.6 - 111.8

0.22

10

AT2-LOCOM

**

CW

16.1

14.2 – 17.8

0.20

12

FACTOR4

*

CW

69.0

63.7 - 71.1

0.20

12

ISO_LBLEAT

*

GW

67.8

65.6 – 70.9

0.22

12

AT1-LBLEAT

*

CW

70.4

66.4 – 71.2

0.27

12

CT1-LBLEAT

**

CW

27.5 (68.4) (68.4)

26.1 – 29.1

0.21

12

CT2-DIST

*

CW

33.1

29.7 – 39.4

0.23

13

FACTOR1

*

CW

41.4

37.1 - 43.1

0.16

13

ISO_HBLEAT

*

CW

39.7

37.5 – 43.9

0.22

13

CT1-HBLEAT

**

GW

41.4

40.5 – 44.0

0.27

16

FACTOR1

***

GW

45.2

41.9 - 48.1

0.24

16

ISO_HBLEAT

**

CW

43.7

41.3 – 49.8

0.24

16

AT1-HBLEAT

*

CW

47.7

39.5 – 49.8

0.21

16

AT2-HBLEAT

***

GW

45.1

41.7 – 46.6

0.30

16

IBT-HBLEAT

*

CW

45.8

42.2 – 48.8

0.25

16

CT2-DIST

**

CW

34.4 (48.0)

33.0 – 36.8

0.24

17

CT1-HBLEAT

**

CW

39.0

35.1 – 42.3

0.19

17

ISO_LBLEAT

*

GW

33.3

30.5 – 36.8

0.26

17

IBT-LOCOM

*

CW

66.4

64.7 – 72.0

0.21

19

CORT

*

CW

41.0

38.9 – 43.2

0.27

20

IBT-LOCOM

**

CW

38.3

36.9 – 43.2

0.26

21

FACTOR4

***

GW

47.6

45.9 - 48.5

0.27

21

AT2-HBLEAT

*

CW

36.0

14.7 – 37.1

0.19

21

ISO_LBLEAT

**

GW

39.3

38.1 – 40.0

0.26

21

AT1-LBLEAT

**

CW

39.3

37.9 – 41.6

0.22

21

CT1-LBLEAT

*

GW

47.3

46.5 – 48.4

0.26

24

CT1-LBLEAT

**

CW

9.8

9.1 – 11.7

0.19

26

FACTOR2

*

CW

42.45

41.9 - 44.7

0.21

  1. Only the significant QTLs reaching the 1% chromosome-wise threshold or the genome-wise thresholds are listed in the table. QTLs reaching the 5% chromosome-wise threshold are also reported if the QTL was also detected for the same trait by association analysis (GWAS). 1: *, p < 5%; **, p < 1%; ***, p < 0.1%. 2: the position of a second significant QTL is indicated between parentheses. 3: average QTL effect given in phenotypic standard deviation. CW, Chromosome Wide; GW, Genome Wide.