Table 3 Summary of QTL detected in GWAS
OAR | Trait | Signifi-cance1 | level | Pos2(Mb) | Confidence interval | No. haplo-types | Flanking markers3 | |
|---|---|---|---|---|---|---|---|---|
2 | FACTOR1 | * | GW | 143.8 | 143.7 - 143.9 | 11 | s01640.1 | OAR2_143893183.1 |
2 | ISO_HBLEAT | ** | CW | 143.8 | 143.7 - 151.1 | 11 | s01640.1 | OAR2_143893183.1 |
3 | FACTOR4 | ** | CW | 136.8 | 136.7 - 136.9 | 9 | OAR3_136802294.1 | OAR3_136865536.1 |
5 | FACTOR1 | * | CW | 92.1 | 92.0 - 92.2 | 11 | OAR5_92064206.1 | OAR5_92169254.1 |
5 | AT1-LBLEAT | ** | CW | 80.3 | 74.3 - 80.4 | 10 | OAR5_80246247.1 | OAR5_80304302.1 |
6 | FACTOR2 | ** | CW | 110.0 | 100.1 - 113.2 | 9 | s29906.1 | OAR6_110056838.1 |
7 | ISO_LBLEAT | ** | CW | 52.1 | 43.5 - 52.2 | 9 | OAR7_52124140.1 | OAR7_52157129.1 |
8 | AT1-LBLEAT | * | GW | 69.1 | 60.9 - 69.2 | 10 | OAR8_69105959.1 | OAR8_69151787.1 |
12 | FACTOR4 | ** | GW | 56.3 | 56.2 - 56.4 | 13 | s63508.1 | OAR12_56302501_X.1 |
12 | AT1-LBLEAT | * | CW | 56.3 | 53.2 - 80.5 | 13 | s63508.1 | OAR12_56302501_X.1 |
12 | AT2-LBLEAT | * | GW | 56.3 | 56.1 - 61.6 | 13 | s63508.1 | OAR12_56302501_X.1 |
12 | CT2-DIST | ** | CW | 32.6 | 25.7 - 32.7 | 10 | OAR12_32559849.1 | OAR12_32617508.1 |
12 | ISO_LBLEAT | ** | GW | 56.2 | 56.1 - 56.3 | 13 | s63508.1 | OAR12_56302501_X.1 |
13 | FACTOR1 | ** | CW | 45.6 | 39.3 - 51.2 | 13 | s73104.1 | s43103.1 |
13 | FACTOR4 | ** | CW | 64.3 | 62.5 - 64.4 | 9 | s00952.1 | s70439.1 |
13 | CT1-LBLEAT | * | CW | 20.5 | 20.4 - 29.3 | 12 | s30126.1 | OAR13_20537279.1 |
13 | ISO_HBLEAT | * | CW | 45.6 | 34.0 - 45.7 | 13 | s73104.1 | s43103.1 |
15 | AT1-LBLEAT | *** | CW | 74.8 | 74.7 - 74.9 | 10 | OAR15_74759937.1 | OAR15_74809345.1 |
16 | FACTOR1 | *** | GW | 43.9 | 43.8 - 46.3 | 11 | OAR16_43833978.1 | OAR16_43916302.1 |
16 | AT1-HBLEAT | * | CW | 46.3 | 42.7 - 46.4 | 13 | OAR16_46290531.1 | OAR16_46325523.1 |
16 | AT2-HBLEAT | ** | GW | 44.3 (20.1) | 44.0 - 45.7 | 14 | OAR16_44325630.1 | s23014.1 |
16 | CT2-DIST | * | CW | 45.4 | 45.3 - 46.3 | 12 | OAR16_45398511.1 | s17055.1 |
16 | IBT-HBLEAT | * | CW | 46.3 | 44.4 - 46.8 | 13 | OAR16_46290531.1 | OAR16_46325523.1 |
16 | ISO_HBLEAT | * | GW | 43.9 | 43.5 - 46.7 | 11 | OAR16_43833978.1 | OAR16_43916302.1 |
17 | FACTOR2 | *** | CW | 5.9 | 5.8 - 7.3 | 11 | OAR17_5938733.1 | OAR17_5979442.1 |
17 | IBT-LOCOM | * | CW | 40.6 | 22.7 - 40.7 | 9 | OAR17_40579701.1 | OAR17_40700344.1 |
17 | ISO_HBLEAT | * | CW | 12.7 | 12.6 - 15.0 | 12 | s42157.1 | OAR17_12809597.1 |
19 | AT2-LOCOM | *** | GW | 18.9 | 18.8 - 19.0 | 9 | OAR19_18888791.1 | s24963.1 |
19 | CORT | * | CW | 39.1 | 39.0 - 41.8 | 7 | OAR19_39084409.1 | OAR19_39123291.1 |
20 | CT2-SEEN | ** | CW | 7.6 | 7.5 - 7.7 | 10 | OAR20_7626319.1 | OAR20_7794638.1 |
21 | FACTOR1 | ** | CW | 38.0 | 36.6 - 40.4 | 9 | OAR21_38037300_X.1 | OAR21_38087037.1 |
21 | AT1-LBLEAT | * | GW | 7.6 | 7.2 - 7.7 | 14 | s54902.1 | OAR21_7730122.1 |
21 | AT2-HBLEAT | * | CW | 38.0 | 25.3 - 45.1 | 9 | OAR21_38037300_X.1 | OAR21_38087037.1 |
21 | ISO_HBLEAT | * | CW | 43.1 | 36.6 - 45.1 | 10 | OAR21_43118557.1 | s61819.1 |
23 | FACTOR2 | * | GW | 32.2 | 32.1 - 32.4 | 12 | OAR23_32137172.1 | s55273.1 |
23 | AT2-LOCOM | * | GW | 54.1 | 51.6 - 54.2 | 10 | OAR23_54064411.1 | s31567.1 |
23 | CT2-SEEN | ** | CW | 32.3 | 27.9 - 32.4 | 10 | s55273.1 | s74857.1 |
23 | HUMAPPRO | ** | CW | 32.2 | 28.9 - 32.3 | 12 | OAR23_32137172.1 | s55273.1 |
26 | FACTOR1 | ** | CW | 6.4 | 4.5 - 9.5 | 10 | s58657.1 | DU481531_204.1 |
26 | FACTOR2 | * | CW | 41.2 | 39.8 - 47.6 | 10 | OAR26_41166096.1 | s07654.1 |
26 | ISO_HBLEAT | ** | CW | 45.4 | 45.3 - 46.8 | 13 | s31164.1 | s16475.1 |