From: Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa
AsRNA antisense to | This study | Ferrara et al. (2012) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
P. aeruginosaPAO1 | P. aeruginosaPAO1 | |||||||||
Gene name | Gene annotation | Gene direction | Name | Start | End | Length | Name | Start | End | Length |
asRNA | asRNA | asRNA | asRNA | asRNA | asRNA | asRNA | asRNA | |||
triC | RND triclosan efflux transporter | > | As6 | 182516 | 182617 | 102 | SPA0111 | 182500 | 182700 | 201 |
gshB | Glutathione synthetase | < | As19 | 448929 | 449284 | 356 | SPA0113 | 449000 | 449400 | 401 |
PA0667 | Conserved hypothetical protein | < | As30 | 718785 | 718934 | 150 | SPA0055 | 719900 | 720200 | 301 |
PA1933 | Probable hydroxylase large subunit | > | As96 | 2113618 | 2113734 | 117 | SPA0059 | 2113600 | 2114100 | 501 |
As97 | 2113817 | 2113927 | 111 | |||||||
nuoA | NADH dehydrogenase I chain A | > | As120 | 2982707 | 2982848 | 142 | SPA0114 | 2982700 | 2982900 | 201 |
PA2759 | Hypothetical protein | < | As128 | 3119347 | 3119453 | 107 | SPA0115 | 3119200 | 3119700 | 501 |
PA3459 | Probable glutamine amidotransferase | > | As152 | 3866017 | 3866206 | 190 | SPA0064 | 3865900 | 3866200 | 301 |
ponA | Penicillin-binding protein 1A | > | AsponA | 5680819 | 5681167 | 349 | SPA0119 | 5680700 | 5681300 | 601 |
PA5480 | Hypothetical protein | > | As246 | 6171684 | 6171915 | 232 | SPA0121 | 6171700 | 6172000 | 301 |
ysxC | Conserved hypothetical protein | > | As247 | 6183216 | 6183389 | 174 | SPA0122 | 6183500 | 6183700 | 201 |