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Table 2 AsRNAs detected in this study and in Ferrara et al. (2012) in P. aeruginosa PAO1[26]

From: Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa

AsRNA antisense to

This study

Ferrara et al. (2012)

 

P. aeruginosaPAO1

P. aeruginosaPAO1

Gene name

Gene annotation

Gene direction

Name

Start

End

Length

Name

Start

End

Length

asRNA

asRNA

asRNA

asRNA

asRNA

asRNA

asRNA

asRNA

triC

RND triclosan efflux transporter

>

As6

182516

182617

102

SPA0111

182500

182700

201

gshB

Glutathione synthetase

<

As19

448929

449284

356

SPA0113

449000

449400

401

PA0667

Conserved hypothetical protein

<

As30

718785

718934

150

SPA0055

719900

720200

301

PA1933

Probable hydroxylase large subunit

>

As96

2113618

2113734

117

SPA0059

2113600

2114100

501

As97

2113817

2113927

111

nuoA

NADH dehydrogenase I chain A

>

As120

2982707

2982848

142

SPA0114

2982700

2982900

201

PA2759

Hypothetical protein

<

As128

3119347

3119453

107

SPA0115

3119200

3119700

501

PA3459

Probable glutamine amidotransferase

>

As152

3866017

3866206

190

SPA0064

3865900

3866200

301

ponA

Penicillin-binding protein 1A

>

AsponA

5680819

5681167

349

SPA0119

5680700

5681300

601

PA5480

Hypothetical protein

>

As246

6171684

6171915

232

SPA0121

6171700

6172000

301

ysxC

Conserved hypothetical protein

>

As247

6183216

6183389

174

SPA0122

6183500

6183700

201

  1. The 4 asRNAs detected in all 3 studies are shown in bold.