Table 5 Ensembl genes which overlap with aligned koala transcripts
Gene category | Total | Overlapping PC transcript(s) | Overlapping Bi transcript(s) | Overlapping either PC or Bi transcript(s) |
|---|---|---|---|---|
Opossum | ||||
protein_coding | 21327 | 14624 | 14170 | 15584 |
pseudogene | 722 | 214 | 211 | 288 |
snRNA | 843 | 118 | 98 | 138 |
snoRNA | 319 | 206 | 184 | 227 |
miRNA | 412 | 107 | 82 | 127 |
rRNA | 176 | 22 | 19 | 25 |
misc_RNA | 77 | 10 | 8 | 10 |
Mt_tRNA | 21 | 3 | 0 | 3 |
Mt_rRNA | 2 | 1 | 0 | 1 |
total | 23899 | 15305 | 14772 | 16403 |
Tasmanian devil | ||||
protein_coding | 18788 | 14971 | 14480 | 15773 |
pseudogene | 178 | 114 | 115 | 128 |
snRNA | 503 | 94 | 57 | 102 |
snoRNA | 277 | 202 | 185 | 213 |
miRNA | 486 | 166 | 113 | 182 |
rRNA | 87 | 14 | 10 | 14 |
misc_RNA | 113 | 20 | 20 | 21 |
Mt_tRNA | 22 | 0 | 0 | 0 |
Mt_rRNA | 2 | 0 | 0 | 0 |
total | 20456 | 15581 | 14980 | 16433 |