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Table 3 MEI detection sensitivity and genotype accuracy for L1 elements

From: Tangram: a comprehensive toolbox for mobile element insertion detection

 

Tangram

Retroseq

 

Sen

Genotype

Sen

Genotype

Het_106bp_10X

90.9%

92.2%

71.5%

27.0%

Het_106bp_20X

92.4%

97.7%

85.3%

90.6%

  1. Results are shown for the Tangram and RetroSeq programs applied to simulated data (1,000 L1 insertions randomly truncated at the 5′ end at random positions in human chromosome 20). “Sen” indicates sensitivity and “Genotype” indicates the genotype accuracy. The best result in each row is indicated in boldface text.
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BMC Genomics

ISSN: 1471-2164

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