Table 7 Sequencing information of CEU trio and 20 1000GP phase I samples used for PCR validation
From: Tangram: a comprehensive toolbox for mobile element insertion detection
Sample | Population | Platform | Coverage | Read length |
|---|---|---|---|---|
NA19397 | LWK | ILLUMINA | 5.9X | 101 bp |
NA19398 | LWK | ILLUMINA | 5.6X | 101 bp |
NA19399 | LWK | ILLUMINA | 5.5X | 101 bp |
NA19404 | LWK | ILLUMINA | 5.8X | 101 bp |
NA19428 | LWK | ILLUMINA | 6.2X | 101 bp |
NA19429 | LWK | ILLUMINA | 6.6X | 108 bp |
NA19434 | LWK | ILLUMINA | 5.6X | 108 bp |
NA19435 | LWK | ILLUMINA | 5.9X | 108 bp |
NA19440 | LWK | ILLUMINA | 16.9X | 108 bp |
NA19443 | LWK | ILLUMINA | 12.4X | 108 bp |
HG00662 | CHS | ILLUMINAHiSEQ | 5.2X | 91 bp |
HG00663 | CHS | ILLUMINAHiSEQ | 5.7X | 91 bp |
HG00671 | CHS | ILLUMINAHiSEQ | 5.9X | 91 bp |
HG00672 | CHS | ILLUMINAHiSEQ | 5.6X | 91 bp |
HG00683 | CHS | ILLUMINAHiSEQ | 5.4X | 91 bp |
HG00684 | CHS | ILLUMINAHiSEQ | 5.8X | 91 bp |
HG00689 | CHS | ILLUMINAHiSEQ | 5.4X | 91 bp |
HG00690 | CHS | ILLUMINAHiSEQ | 5.8X | 91 bp |
HG00464 | CHS | ILLUMINAHiSEQ | 1.3X | 91 bp |
HG00614 | CHS | ILLUMINAHiSEQ | 4.6X | 91 bp |
NA12878 | CEU | Multiple | 65.3X | 47 bp ± 15 bp |
NA12892 | CEU | Multiple | 47.3X | 46 bp ± 10 bp |
NA12891 | CEU | Multiple | 43.0X | 45 bp ± 12 bp |