Figure 3

The scatterplots of scores of different FoxA BS recognition models for BSs derived from ChIP-Seq data [[24]]. Six panels from A to F denote all possible pairwise combinations of ChIPMunk, diChIPMunk, SiteGA and oPWM models. Dots denote the subset of 49722 potential BSs that were mapped in ChIP-Seq peaks with heights of 15 and higher. Solid lines mark thresholds corresponding to the EMSA scores below and above 0.25.