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Table 5 20 most abundant annotated genes involved in “xenobiotics biodegradation and metabolism” in individual tissues

From: De novo transcriptome analysis of Perna viridis highlights tissue-specific patterns for environmental studies

BLAST top-hit description FPKM*
Adductor muscle Gills Hepatopancreas
3-ketoacyl-CoA thiolase, mitochondrial 2.68 18.29 44.68
Acetyl- acetyltransferase mitochondrial 16.01 21.24 10.54
Alcohol dehydrogenase class-3 53.46 30.34 81.41
Aldehyde mitochondrial 7.55 47.66 42.06
ATPase family AAA domain-containing protein 2B 11.38 39.79 56.63
Carbonyl reductase 16.1 68.81 59.44
Cytochrome p450 0.62 11.38 35.83
Cytochrome p450 2c8 1.01 40.79 28.08
Cytochrome p450 2 k1-like 1.65 27.14 12.77
Cytochrome p450 3a-like isoform 1 2.76 4.11 46.21
Cytochrome p450 4f22 14.48 5.51 35.58
Dihydropyrimidinase 21.62 17.10 2.35
Dimethylaniline monooxygenase 1.52 4.14 46.37
Fumarylacetoacetase 8.75 18.67 8.63
Glutathione s-transferase alpha 18.34 34.55 136.66
Glutathione s-transferase pi 1 16.12 15.73 44.15
Glutathione s-transferase sigma 2 0.58 176.58 2.80
Glutathione s-transferase zeta 20.35 21.10 12.28
Glutathione-s-transferase omega class 0.54 56.96 56.97
Hydroxyacyl-coenzyme a mitochondrial 16.01 20.28 56.62
Hypothetical protein BRAFLDRAFT_86061 19.69 65.68 70.07
Hypothetical protein CAPTEDRAFT_149199 8.35 68.49 32.48
Microsomal glutathione s-transferase 2 5.76 20.62 26.62
Microsomal glutathione s-transferase 3 16.04 44.71 26.77
Microsomal glutathione-s-transferase 2.66 38.78 32.88
Monoamine oxidase A 11.64 2.73 12.58
Predicted protein 9.98 99.6 21.26
Regucalcin 0.07 0.26 149.99
Sodium- and chloride-dependent GABA transporter ine 0.62 63.33 143.35
Sorbitol dehydrogenase 7.25 3.22 48.91
Thymidine phosphorylase 4.77 13.95 36.81
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 2.67 5.90 38.77
Trifunctional enzyme subunit beta, mitochondrial-like 26.54 68.98 95.02
Uridine-cytidine kinase-like 1 9.03 16.26 0.35
  1. Note: *Expression levels are presented as FPKM values. The top 20 genes for each tissue are in boldface.