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Table 4 10 top KEGG pathways with high representation of the DEGs

From: De novo transcriptome assembly for rudimentary leaves in Litchi chinesis Sonn. and identification of differentially expressed genes in response to reactive oxygen species

Pathways

No. of DEGs with pathway annotation

Pathway ID

All profiles

Profile 1

Profile 0

Profile 6

Profile 7

(% of 1606)

(% of 837)

(% of 213)

(% of 307)

(% of 144)

Ribosome

147 (9.15%)

122 (14.58%)

11 (5.16%)

2 (0.65%)

11 (7.64%)

ko03010

Plant hormone signal transduction

65 (4.05%)

17 (2.03%)

9 (4.23%)

22 (7.12%)

9 (6.25%)

ko04075

Glycolysis/Gluconeogenesis

62 (3.86%)

32 (3.82%)

7 (3.29%)

12 (3.90%)

10 (6.94%)

ko00010

Starch and sucrose metabolism

57 (3.55%)

20 (2.39%)

14 (6.57%)

11 (3.58%)

8 (5.56%)

ko00500

Purine metabolism

47 (2.93%)

32 (3.82%)

10 (4.69%)

4 (1.30%)

1 (0.69%)

ko00230

Phenylpropanoid biosynthesis

44 (2.74%)

12 (1.37%)

6 (2.82%)

12 (3.91%)

6 (4.17%)

ko00940

Pyrimidine metabolism

44 (2.74%)

30 (3.58%)

11 (5.16%)

2 (0.65%)

1 (0.69%)

ko00240

Pyruvate metabolism

43 (2.68%)

20 (2.39%)

3 (1.41%)

12 (3.91%)

7 (4.86%)

ko00620

DNA replication

40 (2.49%)

31 (3.70%)

9 (4.22%)

0 (0.00%)

0 (0.00%)

ko03030

Plant-pathogen interaction

35(2.18%)

16 (1.91%)

7 (3.29%)

6 (1.95%)

1 (0.69%)

ko04626