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Table 2 Simple sequence repeats (SSRs) predicted in the BrGRF s

From: Genome-wide identification and analysis of the growth-regulating factor family in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

Gene

Motif

No. of repeats

SSR start

SSR end

Lengtha

Intron/exon

BrGRF2

cta

10

641

670

3418

exon

BrGRF3

cat

5

103

117

1505

exon

BrGRF4

ag

13

1383

1408

2138

intron

BrGRF5

tcatcc

4

87

110

1130

exon

BrGRF6

tc

6

487

498

2174

intron

BrGRF10

gct

5

1572

1586

2254

exon

BrGRF10

cat

6

1959

1976

2254

exon

BrGRF11

caa

5

1806

1820

2217

exon

BrGRF12

ca

6

395

406

1696

intron

BrGRF13

tc

6

504

515

2485

intron

BrGRF13

ca

6

1800

1811

2485

intron

BrGRF15

tc

6

517

528

4639

intron

BrGRF15

at

7

3723

3736

4639

intron

BrGRF16

ta

11

1354

1375

2485

intron

BrGRF16

tc

13

1462

1487

2485

intron

BrGRF17

gaa

5

1969

1983

2160

exon

  1. aLength of the gene from the start codon to the stop codon in the genomic sequence. SSRs were identified using SSRIT (http://archive.gramene.org/db/markers/ssrtool).