Table 2 Summary statistics of final assembly
Assembly assessment parameters | Final transcript set |
|---|---|
Number of contigs | 60232 |
Total size of contigs (bp) | 77140699 |
Longest contig (bp) | 24097 |
Shortest contig (bp) | 201 |
Mean contig size (bp) | 1281 |
Median contig size (bp) | 627 |
N50 contig length (bp) | 2571 |
Number of contig > 500 nt | 34746 |
Number of contig > 1000 nt | 22164 |