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Table 1 Characteristics of SNPs tested in two association panels

From: Genome-wide association mapping of quantitative resistance to sudden death syndrome in soybean

 

Total SNPs

Polymorphic SNPs

MAFb > 0.05

Density (kb/SNP)

PICc

Heterozygosity rate

P1 (392a)

52,041

39,554

30,345

35

0.281

1.4%

P2 (300)

5,361

5,132

4,297

241

0.284

1.6%

  1. aNo. of accessions; bMAF, minor allele frequency; cPIC, polymorphism information content.