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Table 5 DEGs potentially caused by DMGs

From: Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets

GeneID Normal cloned group RPKM Abnormal cloned group RPKM log2 ratio abnormal cloned group/normal cloned group) P value FDR Position of regulated methylation Symbol
100154546 66.2 320.5 2.28 0 0 CDS a ABRA
100525414 38.4 156.3 2.02 2.4E-12 2.8E-11 Intron SYNPO2
ENSSSCG00000016792 44.7 139.9 1.65 4.7E-13 6.3E-12 Intron -
733596 14.4 39.0 1.44 0 0 Intronb PLAGL1
100515375 97.6 261.9 1.42 1.7E-12 2.1E-11 Intron LOC100515375
100153598 96.7 238.2 1.30 1E-12 1.3E-11 Down2k TMEM110
ENSSSCG00000001485 48.9 104.4 1.09 4.9E-13 6.5E-12 CDS,Intron,Intron -
100155420 72.6 150.6 1.05 8.4E-13 1.1E-11 Intron NHP2L1
100520312 373.4 181.8 -1.04 3.6E-39 9.2E-38 up2k LOC100520312
ENSSSCG00000006556 1128.1 184.5 -2.61 0 0 up2k Intron TPM3
  1. aSome genes suffered hypomethylation in the abnormal cloned group. The font in italic means hypomethylation.
  2. bSome genes suffered hypermethylation, the font in Roman means hypermethylation.