Table 1 Numbers of TF genes in maize and millet annotated in this study
From: Maize and millet transcription factors annotated using comparative genomic and transcriptomic data
Family* | Millet Zhang gu | Millet Yugu1 | Maize |
|---|---|---|---|
AP2 | 23 | 24 | 26 |
ARF | 24 | 24 | 36 |
ARR-B | 9 | 9 | 9 |
B3 | 56 | 55 | 59 |
BBR-BPC | 3 | 3 | 4 |
BES1 | 10 | 9 | 10 |
bHLH | 177 | 172 | 207 |
bZIP | 92 | 83 | 132 |
C2H2 | 103 | 108 | 137 |
C3H | 40 | 38 | 64 |
CAMTA | 7 | 7 | 8 |
CO-like | 6 | 10 | 17 |
CPP | 7 | 10 | 13 |
CSD (N) | 2 | 0 | 4 |
DBB | 8 | 8 | 14 |
Dof | 24 | 28 | 46 |
E2F/DP | 8 | 7 | 20 |
EIL | 8 | 7 | 9 |
ERF | 126 | 143 | 205 |
FAR1 | 8 | 61 | 19 |
G2-like | 51 | 44 | 66 |
GATA | 30 | 28 | 43 |
GeBP | 12 | 15 | 21 |
GRAS | 62 | 57 | 101 |
GRF | 7 | 10 | 15 |
HB-other | 9 | 8 | 28 |
HB-PHD | 2 | 2 | 4 |
HD-ZIP | 49 | 46 | 65 |
HMG (N) | 10 | 10 | 15 |
HMGI/HMGY (N) | 6 | 6 | 13 |
HRT-like | 1 | 1 | 0 |
HSF | 25 | 22 | 29 |
LBD | 32 | 32 | 44 |
LFY | 1 | 1 | 2 |
LSD | 5 | 5 | 6 |
MBD (N) | 12 | 12 | 13 |
MIKC | 31 | 22 | 43 |
mTERF (N) | 53 | 55 | 31 |
M-type | 40 | 42 | 44 |
MYB | 128 | 121 | 169 |
MYB_related | 80 | 76 | 143 |
NAC | 139 | 141 | 139 |
NF-X1 | 2 | 2 | 4 |
NF-YA | 9 | 10 | 18 |
NF-YB | 16 | 15 | 19 |
NF-YC | 16 | 14 | 19 |
Nin-like | 18 | 17 | 18 |
Pseudo ARR-B (N) | 5 | 4 | 5 |
RAV | 2 | 4 | 3 |
S1Fa-like | 1 | 1 | 2 |
SBP | 20 | 18 | 38 |
SRS | 6 | 6 | 13 |
STAT | 1 | 1 | 1 |
TALE | 24 | 24 | 29 |
TCP | 17 | 18 | 46 |
Trihelix | 27 | 27 | 48 |
VOZ | 2 | 2 | 6 |
Whirly | 2 | 2 | 2 |
WOX | 9 | 13 | 20 |
WRKY | 110 | 109 | 128 |
YABBY | 8 | 8 | 13 |
BED (N) | 9 | 13 | 54 |
ZF-HD | 10 | 8 | 22 |
LITAF (N) | 1 | 1 | 1 |
MIZ (N) | 5 | 3 | 2 |