Table 1 Summary of chromothripsis-like cases identified in previous and current studies
Studya | Chromothripsis-like casesb | Sample size | Techniques | Cancer/sample types |
|---|---|---|---|---|
Stephens et al. [9] | 24 | 776 | Paired-end sequencing, SNP array | 55 cancer typesd |
Kloosterman et al. [13] | 1 | 3c | Mate-pair sequencing | Germline, congenital defects |
Le et al. [17] | 1 | 21 | aCGH | Chordoma |
Magrangeas et al. [14] | 10 | 764 | SNP array | Multiple myeloma |
Bass et al. [18] | 3 | 9 | Whole-genome sequencing | Colorectal adenocarcinoma |
Kloosterman et al. [19] | 4 | 4 | Mate-pair sequencing, SNP array | Colorectal cancer |
Zhang et al. [20] | 3 | 12 | Whole-genome sequencing | Acute lymphoblastic leukaemia |
Kitada et al. [21] | 5 | 150 | aCGH | na |
Poaty et al. [22] | 1 | 14 | aCGH | Gestational choriocarcinoma |
Rausch et al. [23] | 52 | 605 | Whole-genome sequencing, SNP array | 7 cancer types |
Jiang et al. [24] | 1 | 4 | Paired-end sequencing | Hepatocellular carcinoma |
Molenaar et al. [25] | 16 | 87 | Paired-end sequencing, SNP array | Neuroblastoma |
Chiang et al. [11] | 2 | 52 | Whole-genome sequencing, aCGH | Germline |
Lapuk et al. [26] | 1 | 6 | Whole-genome/transcriptome sequencing, aCGH | Neuroendocrine prostate cancer |
Berger et al. [27] | 2 | 25 | Whole-genome sequencing | Melanoma |
Natrajan et al. [28] | 1 | 2 | Whole-genome sequencing | Breast cancer |
Nik-Zainal et al. [29] | 3 | 21 | Whole-genome sequencing | Breast cancer |
Kloosterman et al. [30] | 10 | 10 | Mate-pair sequencing, SNP array | Congenital disease |
Wu et al. [31] | 3 | 3 | Paired-end sequencing, aCGH | Prostate cancer |
Northcott et al. [16] | na | 1087 | SNP array, whole-genome sequencing | Medulloblastoma |
Jones et al. [32] | 2 | 3 | Whole-genome sequencing | Medulloblastoma |
Kroef et al. [33] | 1 | 61 | SNP array | Multiple myeloma |
Govindan et al. [34] | 1 | 17 | Whole-genome sequencing | Non-small cell lung cancer |
Kim et al. [7] | 124 | 8227 | aCGH, SNP array | 30 cancer types |
Zehentner et al. [35] | 1 | 28 | aCGH | Plasma cell neoplasia |
Current study | 918 | 18394 | aCGH, SNP array | 132 cancer typese |