Table 1 List of strains and genomes used in this study
Strain | ST | Pathotype | Accession number |
|---|---|---|---|
E. coli UTI18 | 131 | ExPEC | ERP001095 |
E. coli EC958 | 131 | ExPEC | CAFL01000001 |
E. coli NA114 | 131 | ExPEC | CP002797.1 |
E. coli UTI24 | 131 | ExPEC | ERP001095 |
E. coli UTI32 | 131 | ExPEC | ERP001095 |
E. coli UTI62 | 131 | ExPEC | ERP001095 |
E. coli UTI188 | 131 | ExPEC | ERP001095 |
E. coli UTI226 | 131 | ExPEC | ERP001095 |
E. coli UTI306 | 131 | ExPEC | ERP001095 |
E. coli UTI423 | 131 | ExPEC | ERP001095 |
E. coli UTI587 | 131 | ExPEC | ERP001095 |
E. coli UTI570 | 131 | ExPEC | ERP001095 |
E. coli JIE168 | 131 | ExPEC | ERP001095 |
E. coli JJ1886 | 131 | ExPEC | CP006784.1 |
E. coli SE15 | 131 | Human commensal | AP009378.1 |
E. coli LF82 | 135 | AIEC | NC_011993.1 |
E. coli IHE3034 | 95 | ST95 ExPEC | CP001969.1 |
E. coli UTI89 | 95 | ST95 ExPEC | CP000243.1 |
E. coli S88 | 95 | O45 ExPEC | CU928161.2 |
E. coli APEC01 | 95 | APEC | CP000468.1 |
E. coli UM146 | 643 | AIEC | CP002167.1 |
E. coli NRG857c | 135 | AIEC | CP001855.1 |
E. coli ED1a | 452 | O81 | CU928162.2 |
ABU89372 | 73 | Asymptomatic | CP001671 |
E. coli CFT073 | 73 | ExPEC | AE014075.1 |
E. coli Di14 | 73 | ExPEC | AE014075.1 |
E. coli Di12 | 73 | ExPEC | CP002211.1 |