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Table 1 Genome characteristics of twenty-four sequenced Geobacillus strains

From: Comparative analysis of the Geobacillus hemicellulose utilization locus reveals a highly variable target for improved hemicellulolysis

Species

Strain

Isolation source

Sequencing status

NCBI Acc #

Replicons/contigs

Size (Mb)

G + C%

Ref

G. thermoleovorans

B23

Subterraneon oil reservoir, Japan

Draft

BATY00000000

209

3.35

52.29

[24]

G. thermoleovorans

CCB_US3_UF5

Ulu Slim hot spring, Malaysia

Complete

NC_016593.1

1

3.60

52.28

[25]

G. kaustophilus

HTA426

Deep sea sediment, Marian Trench

Complete

BA000043.1

2

3.59

51.98

[26]

Geobacillus sp.

CAMR5420

-

Draft

JHUS01000000

96

3.49

52.00

[27]

G. kaustophilus

GBlys

Pasteurized milk

Draft

BASG00000000

216

3.54

52.05

[28]

Geobacillus sp.

MAS1

Hot spring, Pakistan

Draft

AYSF00000000

121

3.50

52.21

-

Geobacillus sp.

A8

Deep mine water, South Africa

Draft

AUXP01000000

173

3.35

52.41

-

Geobacillus sp.

CAMR12739

-

Draft

JHUR01000000

74

3.38

52.19

[27]

Geobacillus sp.

C56-T3

Sandy’s Spring W, Nevada, USA

Complete

CP002050.1

1

3.65

52.49

-

Geobacillus sp.

Y412MC61

Obsidian Hot Spring, YNP, USA

Complete

NC_013411.1

2

3.67

52.33

-

Geobacillus sp.

Y412MC52

Obsidian Hot Spring, YNP, USA

Complete

NC_014915.1

2

3.67

52.33

-

Geobacillus sp.

WSUCF1

Compost, USA

Draft

ATCO00000000

346

3.40

52.21

[29]

Geobacillus sp.

GHH01

Soil, Germany

Complete

NC_020210.1

1

3.58

52.28

[30

Geobacillus sp.

C56-T2

Double Hot Springs, Nevada

Draft

SAMN0017395

3

3.55

52.39

-

Geobacillus sp.

JF8

Compost, Japan

Complete

NC_022080.4

2

3.49

52.79

[31]

Geobacillus sp.

G11MC16

-

Draft

ABVH00000000

31

3.55

48.80

-

G. thermodenitrificans

NG80-2

Subterraneon oil reservoir, China

Complete

NC_009328.1

2

3.61

48.86

[32]

G. thermodenitrificans

DSM465T

Sugar beet juice, Austrua

Partial

AYKT00000000

76

3.40

49.05

[33]

G. caldoxylolyticus

CIC9

Hot Spring, Indonesia

Partial

AMRO0000000

82

3.83

44.17

-

G. thermoglucosidasius

C56YS93

Obsidian Hot Spring, YNP, USA

Complete

NC_015660.1

3

4.00

43.93

-

G. thermoglucosidasius

TNO-09.020

Dairy processing plant, Netherlands

Complete

NZ_CM001483

1

3.74

43.82

[34]

G. thermoglucosidasius

M10EXG

Waste-composting unit, Australia

Complete

2501416905a

1

3.67

43.74

-

Geobacillus sp.

Y4.1MC1

Bath Hot Spring, YNP, USA

Complete

NC_014650.1

2

3.84

44.02

-

Geobacillus sp.

WCH70

Middleton, USA

Complete

NC_012793.1

3

3.51

42.80

-

  1. NCBI Acc # refers to the NCBI accession numbers of the genomes for the specified organisms. arefers to the Integrated Microbial Genomes (IMG) object identifier for the genome of G. thermoglucosidasius M10EXG (http://img.jgi.doe.gov).