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Table 6 The differential gene expression of genes encoding LEA protein, HSPs, and RNA helicase in treatment CKA

From: A transcriptomic analysis of Chrysanthemum nankingense provides insights into the basis of low temperature tolerance

Related genes

GeneID

log2 ratio

Up-down-regulation

P-value

FDR

Gene description

LEA

CL1591.Contig3_S2_3

11.63

Up

0.00000056

0.0000101

late embryogenesis abundant protein-like protein

Unigene13900_S2_3

8.57

Up

0

0

late embryogenesis abundant protein 1

CL3193.Contig2_S2_3

6.39

Up

4.99E-161

2.16E-158

Late embryogenesis abundant protein

CL11733.Contig3_S2_3

10.83

Up

0

0

LEA1 protein

CL11733.Contig1_S2_3

8.27

Up

2.69098E-90

6.61827E-88

LEA1 protein

Unigene28071_S2_1

4.42

Up

0

0

LEA5

CL3193.Contig2_S2_3

6.39

Up

4.9929E-161

2.158E-158

Late embryogenesis abundant protein Dc3

Unigene14063_S2_1

-1.16

Down

0.00000526

0.0000813

late embryogenesis abundant protein 3 L-1

HSPs

CL337.Contig29_S2_3

2.81

Up

3.39E-11

9.79E-10

putative heat shock protein 90 family protein

CL1609.Contig2_S2_1

2.29

Up

8.01E-18

3.62E-16

heat shock protein 90

CL1609.Contig12_S2_1

1.67

Up

1.73E-10

4.67E-09

heat shock protein 90-2

CL1609.Contig19_S2_1

1.30

Up

2.44E-16

1.02E-14

heat shock protein 90

CL6923.Contig2_S2_3

1.26

Up

3.84E-71

7.6E-69

heat shock protein, putative

CL1609.Contig10_S2_1

1.08

Up

5.81E-27

4.02E-25

heat shock protein 90

DEAD-box ATP-dependent RNA helicase

CL4257.Contig4_S2_1

2.38

Up

3.15E-24

1.95E-22

DEAD-box ATP-dependent RNA helicase 56-like

Unigene6176_S2_3

2.29

Up

6.45E-22

3.62E-20

DEAD-box ATP-dependent RNA helicase 32-like

CL8809.Contig2_S2_3

2.17

Up

4.76E-07

8.64E-06

DEAD-box ATP-dependent RNA helicase 26-like

CL4129.Contig1_S2_1

1.82

Up

4.02E-122

1.30E-119

DEAD-box ATP-dependent RNA helicase 31-like

CL869.Contig2_S2_1

1.45

Up

3.01E-38

3.03E-36

DEAD-box ATP-dependent RNA helicase 28-like

Unigene233_S2_1

1.21

Up

1.32E-07

2.59E-06

dead box ATP-dependent RNA helicase, putative

Unigene73562_S2_1

1.21

Up

6.32E-46

7.85E-44

DEAD-box ATP-dependent RNA helicase 47, mitochondrial

CL6411.Contig2_S2_1

1.12

Up

1.06E-05

0.000155014

dead box ATP-dependent RNA helicase, putative

Unigene27627_S2_3

1.05

Up

2.71E-07

5.10E-06

DEAD-box ATP-dependent RNA helicase 24-like

Unigene14283_S2_1

1.04

Up

1.55E-21

8.56E-20

DEAD-box ATP-dependent RNA helicase 21-like

 

Unigene97540_S2_3

1.04

Up

4.90E-09

1.13E-07

DEAD-box ATP-dependent RNA helicase 50-like