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Figure 2 | BMC Genomics

Figure 2

From: Variant calling in low-coverage whole genome sequencing of a Native American population sample

Figure 2

Concordance with exome chip. Concordance between exome chip genotypes and genotypes from three variant callers (a) and false positive rate (b). One point (at depth = 30.4, concordances between 96.7% and 98%) has been removed to expand the data region. The concordance is calculated only at the sites that are measured as non-monomorphic in the exome chip genotypes.

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