Figure 7From: Six newly sequenced chloroplast genomes from prasinophyte green algae provide insights into the relationships among prasinophyte lineages and the diversity of streamlined genome architecture in picoplanktonic speciesRelationships among prasinophyte lineages inferred using a data set of 15,549 positions assembled from 79 cpDNA-encoded proteins of 34 green plant taxa. Trees were inferred using PhyloBayes under the CATGTR + Γ4 model and RAxML under the LG4X, GTR + Γ4 and gcpREV + Γ4 models. In the ML analyses, the data set was partitioned by gene, with the model applied to each of the 79 partitions. The Bayesian majority-rule consensus tree is presented. Support values are reported on the nodes: from top to bottom, or from left to right, are shown the BP values for the LG4X, GTR + Γ4 and gcpREV + Γ4 analyses, and the PP values for the CATGTR + Γ4 analyses. Dashes (−) indicate lower than 0.95 PP or 40% BP support values; black dots indicate that the corresponding nodes received 1.00 PP and 100% BP support values. The scale bar denotes the estimated number of amino acid substitutions per site.Back to article page