From: iMSAT: a novel approach to the development of microsatellite loci using barcoded Illumina libraries
 | A) Phobos | B) MSATCOMMANDER | C) iMSAT | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
repeats | di | tri | tetra | penta | di | tri | tetra | penta | di | tri | tetra | penta |
5 | 21729 | 7100 | 347 | 29 | 35052 | 16556 | 890 | 33 | 9 | 8 | 3 | 0 |
6 | 12739 | 4282 | 123 | 1 | 22177 | 9949 | 326 | 4 | 39 | 7 | 14 | 0 |
7 | 8973 | 2628 | 37 | 1 | 16641 | 5961 | 133 | 3 | 63 | 12 | 13 | 0 |
8 | 7009 | 1546 | 12 | 1 | 13107 | 3231 | 65 | 2 | 149 | 30 | 11 | 0 |
9 | 5416 | 848 | 6 | 0 | 9805 | 1580 | 38 | 3 | 275 | 25 | 4 | 0 |
10 | 3860 | 389 | 6 | 1 | 6850 | 754 | 26 | 0 | 344 | 12 | 10 | 0 |
11 | 2746 | 193 | 2 | 0 | 4844 | 382 | 11 | 0 | 260 | 6 | 5 | 0 |
12 | 1890 | 97 | 2 | 0 | 3282 | 173 | 4 | 0 | 244 | 2 | 2 | 0 |
13 | 1283 | 39 | 2 | 0 | 2403 | 95 | 9 | 0 | 164 | 2 | 4 | 0 |
14 | 937 | 14 | 2 | 0 | 1875 | 50 | 9 | 0 | 133 | 5 | 0 | 0 |
15 | 793 | 12 | 1 | 0 | 1518 | 32 | 7 | 0 | 100 | 1 | 0 | 0 |
16 | 709 | 3 | 1 | 0 | 1433 | 14 | 5 | 0 | 81 | 0 | 0 | 0 |
17 | 608 | 4 | 0 | 0 | 1205 | 9 | 1 | 0 | 84 | 0 | 0 | 0 |
18 | 577 | 3 | 0 | 0 | 1283 | 8 | 0 | 0 | 53 | 0 | 0 | 0 |
19 | 626 | 2 | 0 | 0 | 1228 | 10 | 0 | 0 | 44 | 0 | 0 | 0 |
20 | 604 | 5 | 0 | 0 | 1211 | 2 | 0 | 0 | 35 | 0 | 0 | 0 |
21+ | 12028 | 24 | 0 | 0 | 16100 | 18 | 0 | 0 | 125 | 0 | 0 | 0 |
SUM | 82527 | 17189 | 541 | 33 | 146877 | 38824 | 1524 | 45 | 2202 | 110 | 66 | 0 |
Percent | 82.3 | 17.1 | 0.5 | 0.03 | 78.4 | 20.7 | 0.8 | 0.02 | 92.6 | 4.6 | 2.8 | 0 |