Table 4 Comparison of OGSv1.0 and OGSv3.2
From: Finding the missing honey bee genes: lessons learned from a genome upgrade
| Â | OGSv1.0 | OGSv3.2 |
|---|---|---|
Number of genes | 10,157 | 15,314 |
Number of genes within mapped scaffolds (% of total no. of genes) | 5,973 (58.8%) | 13,285 (86.8%) |
Number of genes within un-mapped scaffolds (% of total no. of genes) | 4,184 (41.2%) | 2,029 (13.2%) |
Average coding sequence length (bp) | 1,623 | 1,266 |
Average number of coding exons | 6.4 | 5.3 |
Number of single coding exon genes (% of total no. of genes) | 795 (7.8%) | 2,059 (13.4%) |
Number of multi-coding exon genes (% of total no. of genes) | 9,362 (92.2%) | 13,255 (86.6%) |
Number of genes with spliced EST coverage (% of total no. of genes) | 3,039 (29.9%) | 12,172 (79.5%) |
Number of genes with un-spliced EST coverage (% of total no. of genes) | 1,734 (17.1%) | 11,019 (72%) |
Number of genes that overlap a protein alignment (% of total no. of genes) | 7,940 (78.2%) | 6,778 (44.3%) |