Table 2 Breast cancer Affymetrix U133A microarray datasets
From: Statistical measures of transcriptional diversity capture genomic heterogeneity of cancer
GEO dataset | N | PAM50 subtype | Response group basal-like | |||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Basal | Her2 | LumA | LumB | Normal | pCR | RD |
GSE11121 | 200 | 23 | 18 | 110 | 24 | 25 | 0 | 0 |
GSE20194 | 91 | 18 | 30 | 16 | 13 | 14 | 7 | 6 |
GSE20271 | 81 | 19 | 15 | 22 | 9 | 16 | 4 | 15 |
GSE2034 | 286 | 63 | 35 | 99 | 51 | 38 | 0 | 0 |
GSE22093 | 96 | 44 | 14 | 16 | 12 | 10 | 18 | 24 |
GSE25055 | 310 | 120 | 22 | 97 | 46 | 25 | 45 | 73 |
GSE25065 | 198 | 68 | 15 | 62 | 34 | 19 | 22 | 41 |
GSE7390 | 198 | 48 | 22 | 93 | 21 | 14 | 0 | 0 |
Total | 1460 | 403 | 171 | 515 | 210 | 161 | 96 | 159 |