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Table 1 List of genomic features provided by VAS

From: VAS: a convenient web portal for efficient integration of genomic features with millions of genetic variants

Type Genomic features
Chromatin ENCODE open chromatin, histone modifications,protein-DNA binding [8], Roadmap EpigenomicsDNA methylation [10]
Genomic states ChromHMM segmentation [22], supervised genomicregion classification [23]
Expression ENCODE RNA-seq [8]
Sequence UCSC [24] conservation scores [25, 26], transcriptionfactor binding motifs [27], sequence uniqueness [28],repeats [29], GC content
Annotation Gencode [30]
Variations dbSNP [31]
Diseases GWAS Catalog [32], The Human Gene MutationDatabase [33]