Skip to main content

Table 1 A comparison of K. brevis transcriptome read number, locus number, apparently clone-unique locus number, N50 length, and mean locus length values

From: De novo assembly and characterization of the transcriptome of the toxic dinoflagellate Karenia brevis

Clone

# Reads

# Loci

% Isoforms

# Unique loci

N50 (bp)

Mean locus length (bp)

Wilson

58,535,595

86580

34

3712

2038

1340

SP1

77,994,379

93668

35

8202

2124

1376

SP3

51,363,303

84309

85

2606

3424

1941

  1. The % isoforms column lists the percentage of loci that were assigned two or more isoforms by Velvet-Oases.