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Table 1 Sequencing statistics and genome statistics for six members of the Leptosphaeria maculans-L. biglobosa species complex

From: Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens

  L. maculans‘brassicae’ L. maculans‘lepidii’ L. biglobosa‘brassicae’ L. biglobosa‘canadensis’ L. biglobosa‘thlaspii’
  v23.1.3 WA74 IBCN84 B3.5 J154 IBCN65
Genome size (Mb) 45.1 44.2 31.5 31.8 30.2 32.1
Contig number 1743 3765 2802 2533 7124 3506
Scaffold number 76 986 123 606 6748 237
Scaffold N50 (kb) 1770 263 1356 779 245 715
Gaps (%) 2.5 9.6 7.1 7.4 0.1 8.7
Repeats (%) 35.5 27.5 4.0 4.4 3.9 5.1
Transposable elements (TEs) (%) 32.5 25.8 2.7 3.2 2.9 4.0
‘Ancestral’ genome size (Mb)a 29.3 28.5 28.4 28.4 29.3 28.0
GC content of the whole genome (%) 45.2 46.5 50.9 51.4 51.1 51.4
GC ‘ancestral’ genome’ (%) 51.6 51.6 51.6 52.0 51.6 52.1
GC content of TEs (%) 34.3 34.5 32.3 36.6 34.7 36.6
Predicted gene number 12543 10624 11272 11390 11068 11691
  1. a‘Ancestral genome’ refers to the core genome without TEs.