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Table 2 PSEUDO and LNCRNA sets are expressed with no statistic significance in correspondence to flanking genes

From: The parasite Trichomonas vaginalis expresses thousands of pseudogenes and long non-coding RNAs independently from functional neighbouring genes

  

Frequency

Mean distance (bp)

Statistics

Dataset

Orientation

Absolute

%

Upstream

Downstream

Pvalue

FDR

PSEUDO

Convergent

265

24.6

1419.4

1665.3

0.29

0.29

 

Divergent

260

24.2

1485.3

1543.3

0.21

0.29

 

Co-oriented

295

27.4

1286.8

1511.5

0.22

0.29

 

Anti-oriented

256

23.8

1459.9

1508.0

0.03

0.10

LNCRNA

Convergent

233

17.5

1266.9

1207.4

0.42

0.55

 

Divergent

434

32.6

1250.0

1162.6

0.13

0.34

 

Co-oriented

329

24.7

1145.1

1283.7

0.69

0.69

 

Anti-oriented

334

25.1

1430.1

1106.4

017

0.34