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Figure 1 | BMC Genomics

Figure 1

From: Evaluation of variant identification methods for whole genome sequencing data in dairy cattle

Figure 1

Distributions of single nucleotide variant counts (a), insertion and deletion counts (b), and multi-allelic site counts (c) identified per animal. For Platypus results, multi-nucleotide variants were split into allelic primitives for fair comparison between software. Single nucleotide variant counts (a), insertion and deletion counts (b), and multi-allelic site counts (c) identified per animal (n = 65; BTA1-29, BTAX) using single sample variant detection with Platypus, Samtools, and the UnifiedGenotyper following three pre-calling approaches.

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