| |
S. senegalensis
|
S. solea
|
|---|
| |
v3
|
v4
|
v1
|
|---|
| |
Transcripts
|
%
|
Transcripts
|
%
|
Transcripts
|
%
|
|---|
|
Transcripts
|
252,416
|
-
|
697,125
|
-
|
523,637
|
-
|
|
Artifacts2
|
nc
|
-
|
7,095
|
1.02
|
10,086
|
1.92
|
|
Valid transcripts
|
252,416
|
100.00
|
701,767
|
100.00
|
531,463
|
100.00
|
|
>500pb
|
37,593
|
14.90
|
156,083
|
22.24
|
165,860
|
31.22
|
|
>200pb
|
168,914
|
66.92
|
385,411
|
54.92
|
338,967
|
63.89
|
|
Longest transcript
|
6,050
|
-
|
40,163
|
-
|
30,526
|
-
|
|
Transcripts with ortholog1
|
81,348
|
32.23
|
147,536
|
21.02
|
121,696
|
22.90
|
|
Different orthologous IDs
|
41,792
|
51.37
|
45,063
|
30.54
|
38,402
|
31.56
|
|
Complete ORFs
|
6,742
|
8.31
|
39,727
|
26.93
|
52,051
|
42.77
|
|
Different, complete ORFs
|
4,376
|
5.38
|
18,738
|
12.70
|
22,683
|
18.64
|
|
C-terminus
|
14,757
|
18.14
|
27,080
|
18.35
|
19,579
|
16.09
|
|
N-terminus
|
11,298
|
13.88
|
27,638
|
18.73
|
25,131
|
20.65
|
|
Internal
|
47,529
|
58.43
|
53,091
|
35.99
|
24,935
|
20.49
|
|
Putative ncRNAs
|
539
|
0.21
|
1,252
|
0.18
|
1,075
|
0.20
|
|
Transcripts without ortholog1
|
171,067
|
67.56
|
545,491
|
77.73
|
408,692
|
76.90
|
|
Putative new transcripts
|
22,612
|
13.21
|
39,812
|
7.30
|
34,194
|
8.37
|
|
Non-redundant new transcripts
|
nc
|
–
|
14,451
|
2.65
|
15,603
|
3.55
|
|
Unknown
|
147,916
|
86.48
|
505,679
|
92.70
|
374,498
|
91.63
|
|
Reference transcriptome
|
nc
|
–
|
v4.1: 59,514
|
8.48
|
v1.1: 54,005
|
10.16
|
- The values were calculated using FullLengtherNext software. The minimum number of transcripts that can be considered as a reference transcriptome is shown in bold.
- 1Percentages for subclassifications of this category were calculated using this line as 100% reference.
- 2Artifacts refer mainly to misassemblies and chimeric contigs.
- nc: Non-calculated.
