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Table 2 The combinations of 4 repeated female

From: An improved 2b-RAD approach (I2b-RAD) offering genotyping tested by a rice (Oryza sativa L.) F2 population

Reads number Depth Combination Covered sites Coverage rate
2333752 12.8 fe-1 151387 83.71%
2225621 12.2 fe-2 151352 83.69%
1575530 8.5 fe-3 150720 83.34%
2456057 13.4 fe-4 156650 86.62%
3909282 21.6 fe-3 + fe-1 178654 98.79%
3801151 21.0 fe-3 + fe-2 177239 98.00%
4031587 22.3 fe-3 + fe-4 178946 98.95%
6134903 33.9 fe-3 + fe-1 + fe-2 180098 99.59%
8590960 47.5 fe-3 + fe-1 + fe-2 + fe-4 180104 99.59%
  1. “fe” means female parent; “reads number” means the reads which were able to be mapped to reference; “depth” equals to reads number divided by the total expected BsaXI recognition sites ; “covered sites” means the BsaXI sites in reference which was covered by high quality reads; “coverage rate” equals to the “covered sites” divided by the total expected BsaXI recognition sites.