Genome-wide patterns of copy number variation in the diversified chicken genomes using next-generation sequencing

BMC Genomics

Table 2 Comparison between autosomal CNVRs identified in this study and other chicken studies

Platforms	Results from different studies					Overlapped CNVRs in this study
	Study	Breed	Samples	Number	Total length (Mb)	Number	Pct. of number (%)	Total length (Mb)	Pct. of length (%)
Sequencing-based study	This study	12	12	7,530	88.12
CGH-based studies	Wang et al. 2010 [40]	3	10	91	15.72	162	2.15	2.66	3.02
	Wang et al. 2012 [9]	3	6	130	3.34	83	1.10	0.92	1.04
	Crooijmans et al. 2013 [34]	7	64	1,504	57.44	721	9.58	8.30	9.42
	Luo et al. 2013 [39]	4	6	29	1.46	21	0.28	0.42	0.47
	Tian et al. 2013 [33]	11	22	308	10.81	166	2.20	2.00	2.27
	Abernathy et al. 2014 [41]	2	12	147	4.18	68	0.90	0.63	0.71
SNP-based study (60 K)	Jia et al. 2013 [32]	2	746	209	13.55	141	1.87	1.75	1.99
Sequencing-based study	Fan et al. 2013 [36]	2	2	415	3.17	96	1.27	0.80	0.90
Total						1,052	13.97	12.45	14.13

ISSN: 1471-2164