Category
|
Ao(Mh)
|
Ao(Hs)
|
Ad(Mh)
|
Ad(Hs)
|
Mc(Hs)
|
---|
Secreted proteins
| | | | | |
All isotigs
|
8.4
|
9.4
|
7.8
|
8.6
|
9.1
|
Top 500 most expressed isotigs
|
12.2
|
12.6
|
12.6
|
10.8
|
13.8
|
(Pb)
|
(0.00031)
|
(0.00070)
|
(0.00002)
|
(0.01205)
|
(0.00008)
|
Orphans
c
| | | | | |
All isotigs
|
6.6
|
7.1
|
8.1
|
7.5
|
6.9
|
Top 500 most expressed isotigs
|
7.8
|
7.6
|
12.8
|
9.6
|
9.2
|
(Pb)
|
(0.03792)
|
(0.07609)
|
(0.00004)
|
(0.01176)
|
(0.00818)
|
- aProportion of secreted proteins and orphans among all identified isotigs (i.e. transcripts) and among the 500 most expressed isotigs in each sample. The samples are: A. oligospora infecting M. hapla (Ao(Mh)), A. oligospora infecting H. schachtii (Ao(Hs)), A. dactyloides infecting M. hapla (Ad(Mh)), A. dactyloides infecting H. schachtii (Ad(Hs)), and M. cionopagum infecting H. schachtii (Mc(Hs)).
- bThe probability (P) of observing a given number of isotigs within the functional category by chance using the hypergeometric distribution.
- cIsotigs that lack known homologs and do not contain any Pfam domains.