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Table 5 Differentially expressed genes encoding secreted proteins in A. oligospora during infection of M. hapla or H. schachtii a

From: Interspecific and host-related gene expression patterns in nematode-trapping fungi

UniProt ID Descriptionb Pfam Lengthc Fold change
Upregulated in M. hapla    
G1X4P0 Histidine acid phosphatase His_Phos_2 476 9.1
G1XTC9 Patched sphingolipid transporter Patched 1 292 9.1
G1XF88 Uncharacterized protein - 251e 7.7
G1XGH3 IgE-binding protein - 195 7.4
G1XHE8d - - 196e 6.9
G1X1U4 Glucosidase 2 subunit beta - 553 6.3
G1X8R3 GPI anchored cell-wall protein But2 328 6.2
G1XCM7 Beta-galactosidase Glyco_hydro_35, BetaGal_ dom2, BetaGal_dom3, BetaGal_dom4_5 982 5.7
G1XET4 Peptidase S41 Peptidase_S41 702 5.7
G1XGI5 Uncharacterized protein - 107e 5.3
G1XPV3 Uncharacterized protein - 173e 5.3
G1XJP0 Uncharacterized protein - 606 5.1
G1XLE5 Aminopeptidase Y PA, Peptidase_M28 503 5.1
Upregulated in H. schachtii    
G1X7Q6d - - 300 15.8
G1XQA9 Uncharacterized protein - 707 15.8
G1XU57 ABC transporter ABC_tran, ABC2_membrane 1 047 15.8
G1X110d - - 151e 11.4
G1XR64 Uncharacterized protein DUF3129 656 10.5
G1XF27 WSC-domain-containing protein WSC 625 9.6
G1XEV7 Chitinase Glyco_hydro_18, LysM 1 232 8.8
G1XM84 Tyrosinase Tyrosinase 387 8.8
G1XC55 Uncharacterized protein DUF3129 454 6.4
  1. aGenes encoding proteins with a predicted secretion signal that were upregulated at least 5-fold in the sample A. oligospora infecting M. hapla (Ao(Mh)) compared to the sample A. oligospora infecting H. schachtii (Ao(Hs)) and in Ao(Hs) compared to Ao(Mh). Genes that were expressed (≥1 read) in both libraries and that had ≥5 read in any of the libraries were included in the analysis, in total 4 138 genes.
  2. bNon-annotated genes of A. oligospora were further characterized by searches through the UniProt database [47] using the BLASTP algorithm [25] with an E-value threshold of 1e-10. Fungal sequences were chosen among the top hits.
  3. cThe length of the protein sequence in aa.
  4. dOrphan, protein that lacks known homologs and does not contain any Pfam domains.
  5. eSmall secreted protein (SSP) with unknown function. SSPs were defined as secreted proteins with a length of less than 300 aa.