|
Read
|
BWA
|
NGM
|
NGM+
|
NGM+
|
NGM+
|
|---|
|
length
| | |
MaxSSmap_fast
|
MaxSSmap
|
CUDA-SW++
|
|---|
|
36
|
1.2 (0)
|
33.3 (10.5)
|
34 (16.5)
|
43.8 (18.1)
|
53.2 (17.1)
|
|
51
|
11.4 (0.2)
|
50.5 (3)
|
53.3 (8.8)
|
71.2 (7.5)
|
79.5 (6.2)
|
|
76
|
38.4 (.7)
|
70.2 (1.5)
|
76.5 (4.3)
|
92.9 (2.7)
|
96.6 (1.8)
|
|
100
|
62.4 (1)
|
82.6 (1.4)
|
91 (2.2)
|
96.8 (1.9)
|
98.1 (1.5)
|
|
150
|
76 (1.1)
|
82.5 (1.2)
|
92 (2.2)
|
93.8 (2.2)
|
94.7 (2.1)
|
|
Time in minutes to map reads
|
|
36
|
0.09
|
0.3
|
26.6
|
37.8
|
315.9
|
|
51
|
0.11
|
0.5
|
26.6
|
38.2
|
284.9
|
|
76
|
0.15
|
0.6
|
19.8
|
28.4
|
201.9
|
|
100
|
0.22
|
0.7
|
14.8
|
21
|
129.9
|
|
150
|
0.34
|
0.9
|
19.6
|
29.2
|
173.8
|
- Shown in parenthesis are incorrectly mapped reads and remaining are rejected. We denote NextGenMap by NGM.
