Read | BWA | NGM | NGM+ | NGM+ | NGM+ |
---|---|---|---|---|---|
length | Â | Â | MaxSSmap_fast | MaxSSmap | CUDA-SW++ |
36 | 1.2 (0) | 33.3 (10.5) | 34 (16.5) | 43.8 (18.1) | 53.2 (17.1) |
51 | 11.4 (0.2) | 50.5 (3) | 53.3 (8.8) | 71.2 (7.5) | 79.5 (6.2) |
76 | 38.4 (.7) | 70.2 (1.5) | 76.5 (4.3) | 92.9 (2.7) | 96.6 (1.8) |
100 | 62.4 (1) | 82.6 (1.4) | 91 (2.2) | 96.8 (1.9) | 98.1 (1.5) |
150 | 76 (1.1) | 82.5 (1.2) | 92 (2.2) | 93.8 (2.2) | 94.7 (2.1) |
Time in minutes to map reads | |||||
36 | 0.09 | 0.3 | 26.6 | 37.8 | 315.9 |
51 | 0.11 | 0.5 | 26.6 | 38.2 | 284.9 |
76 | 0.15 | 0.6 | 19.8 | 28.4 | 201.9 |
100 | 0.22 | 0.7 | 14.8 | 21 | 129.9 |
150 | 0.34 | 0.9 | 19.6 | 29.2 | 173.8 |