Skip to main content

Table 1 Number of raw reads obtained from samples obtained from the Illumina GAIIx sequencing

From: A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California

Sample Rep Number of raw read pairs Number of reads mapped to filtered transcriptome (%)
Vienna7 adults, γ-irradiated 1 13,192,327 6,136,921 (46.52)
Vienna7 adults, γ-irradiated 2 9,595,143 5,075,214 (52.89)
Vienna7 adults, γ-irradiated 3 11,360,677 5,236,787 (46.10)
Vienna7 pupae, γ-irradiated 1 10,582,671 5,035,268 (47.58)
Vienna7 pupae, γ-irradiated 2 9,548,323 4,830,945 (50.59)
Vienna7 pupae, γ-irradiated 3 11,750,225 5,906,277 (50.27)
Vienna7 adults 1 11,893,729 5,540,467 (46.58)
Vienna7 adults 2 9,207,645 4,767,827 (51.78)
Vienna7 adults 3 11,887,697 6,077,674 (51.13)
Vienna7 pupae 1 13,700,496 7,150,689 (52.19)
Vienna7 pupae 2 5,836,933 3,234,876 (55.42)
Vienna7 pupae 3 4,698,850 2,473,191 (52.63)
Wild Hawaiian adults 1 7,463,699 3,524,921 (47.23)
Wild Hawaiian adults 2 10,915,724 4,983,183 (45.65)
Wild Hawaiian adults 3 11,412,891 4,996,645 (43.78)
Wild Hawaiian pupae 1 12,312,072 5,689,915 (46.21)
Wild Hawaiian pupae 2 11,240,088 5,219,322 (46.43)
Wild Hawaiian pupae 3 13,587,015 6,175,680 (45.45)
Total   190,186,205 92,055,802