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Table 10 Gene regulation patterns in the flavonoid pathway

From: Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture

Enzyme

EC number

Up-regulated

Down-regulated

  

Unigene ID

Expression level fold

Unigene ID

Expression level fold

PAL

4.3.1.24

Unigene10327_All

1.1

Unigene83336_All

−1.9

Unigene89418_All

1

Unigene56631_All

−1.9

  

Unigene64872_All

−1.6

Unigene619_All

−1.3

Unigene9322_All

−1

C4H

1.14.13.11

Unigene67845_All

1.4

Unigene17324_All

−2.5

  

Unigene11543_All

−1.7

Unigene93243_All

−1.1

4CL

6.2.1.12

Unigene41852_All

2.2

Unigene88072_All

−3.3

Unigene36813_All

1.2

Unigene37844_All

−3

Unigene3277_All

1.1

Unigene68813_All

−2.8

  

Unigene44539_All

−2.3

Unigene51006_All

−2.2

Unigene32973_All

−2.1

Unigene85725_All

−2

Unigene28297_All

−1.9

Unigene57823_All

−1.8

Unigene520_All

−1.7

Unigene19555_All

−1.7

Unigene20812_All

−1.5

Unigene10021_All

−1.4

Unigene6803_All

−1.4

Unigene20574_All

−1.4

CHS

2.3.1.74

Unigene1735_All

1.5

Unigene35484_All

−2.2

  

Unigene31906_All

−1.8

Unigene37184_All

−1.4

Unigene33635_All

−1.3

Unigene63145_All

−1.3

Unigene55042_All

−1.1

Unigene29406_All

−1.1

F3H

1.14.11.9

Unigene49558_All

3.8

Unigene100816_All

−1.6

Unigene5973_All

1.4

Unigene4657_All

−1.6

  

Unigene22973_All

−1.4

Unigene4884_All

−1.3

Unigene23932_All

−1.1

FLS

1.14.11.23

Unigene49558_All

3.8

Unigene100816_All

−1.6

Unigene89505_All

1.8

Unigene4657_All

−1.6

Unigene56837_All

1.8

Unigene22973_All

−1.4

Unigene26406_All

1.6

Unigene4884_All

−1.3

  

Unigene5973_All

1.4

Unigene23932_All

−1.1

  

Unigene33774_All

−1

DFR

1.1.1.219

  

Unigene100192_All

−2.8

Unigene40110_All

−1.9

Unigene84008_All

−1.7

Unigene49734_All

−1.3

ANS

1.14.11.19

Unigene49558_All

3.8

Nigene100816_All

−1.6

Unigene89505_All

1.8

Unigene4657_All

−1.6

Unigene56837_All

1.8

Unigene4884_All

−1.3

  

Unigene30270_All

−1.1

LAR

1.17.1.3

  

Unigene73982_All

−1

  1. The genes include phenylalanine ammonia lyase (PAL), cinnamate-4-hydroxylase (C4H), 4-coumarate-CoA ligase (4CL), chalcone synthase (CHS), favanone-3-hydroxylase (F3H), flavonol synthase (FLS), dihydroflavonol-4-reductase (DFR), anthocyanin synthase (ANS) and leucoanthocyanidin reductase (LAR).