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Table 5 Transcription regulators identified in Boesenbergia rotunda based on transcription regulators in the rice database using iTAK software

From: Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture

  Transcriptional regulator ( Boesenbergia rotunda) Number of genes Up-regulated Down-regulated Transcription regulator (Oryza sativa) Number of genes
1 Orphans 9 2 3 Orphans 79
2 AUX/IAA 8 1 1 AUX/IAA 32
3 SET 5 1 0 SET 41
4 SNF2 4 0 2 SNF2 39
5 TRAF 4 0 1 TRAF 59
6 RB 3 0 0 RB 2
7 SWI/SNF-BAF60b 3 0 0 SWI/SNF-BAF60b 11
8 MED6 2 0 0 MED6 1
9 PHD 2 0 1 PHD 39
10 GNAT 1 0 0 GNAT 35
11 HMG 1 0 0 HMG 9
12 Jumonji 1 0 0 Jumonji 14
13 Rcd1-like 1 0 0 Rcd1-like 5
14 SOH1 1 0 0 SOH1 2
15 SWI/SNF-SWI3 1 0 1 SWI/SNF-SWI3 4
16 ARID 0 0 0 ARID 6
17 Coactivator p15 0 0 0 Coactivator p15 3
18 DDT 0 0 0 DDT 7
19 IWS1 0 0 0 IWS1 17
20 LUG 0 0 0 LUG 6
21 MBF1 0 0 0 MBF1 2
22 MED7 0 0 0 MED7 1
23 Pseudo ARR-B 0 0 0 Pseudo ARR-B 5
Total 46 4 9   419