Table 1 Assessment of the 3D localization of functional annotations in P. falciparum Ring stage
From: Distance-based assessment of the localization of functional annotations in 3D genome reconstructions
Functional annotation | MPED | Contact enrichment |
|---|---|---|
q-values | q-values | |
Centromeres | 6.0e-05 | 8.4e-05 |
Telomeres | 6.0e-05 | 8.4e-05 |
VRSM (all) | 6.0e-05 | 8.4e-05 |
VRSM (subtelomeric) | 6.0e-05 | 8.4e-05 |
VRSM (internal) | 1.6e-04 | 8.4e-05 |
rDNA genes | 0.42 | 0.10 |
Cluster 1 | 0.73 ↓ | 0.17 |
Cluster 2 | 4.4e-02 | 0.70 ↓ |
Cluster 3 | 0.18 | 0.45 ↓ |
Cluster 4 (Ring) | 6.0e-05 | 1.0e-02 |
Cluster 5 (Ring) | 0.24 | 0.45 ↓ |
Cluster 6 (Ring | 6.0e-05 | 0.70 ↓ |
Cluster 7 (Ring) | 6.0e-05 | 0.39 ↓ |
Cluster 8 | 4.0e-02 | 0.86 ↓ |
Cluster 9 | 1.0e-02 | 0.39 ↓ |
Cluster 10 | 2.1e-03 | 0.81 |
Cluster 11 | 0.10 | 0.74 ↓ |
Cluster 12 | 9.2e-03 | 0.11 ↓ |
Cluster 13 | 6.5e-02 | 0.44 ↓ |
Cluster 14 | 0.11 | 0.70 ↓ |
Cluster 15 | 5.2e-02 | 0.81 ↓ |