Table 1 SVM and MDSM scores for validated set.
PDZ domain | Peptide | SVM score | MDSM score | Pubmed Ref. |
|---|---|---|---|---|
Cipp-(3/10) | IESDV | 0.44 | -0.7 | 9647694 |
Cipp-(3/10) | LESEV | 0.30 | -0.62 | 9647694 |
Cipp-(3/10) | QQSNV | 0.29 | -0.78 | 9647694 |
Cipp-(3/10) | KEYYV | 0.51 | -0.34 | 9647694 |
Dvl1-(1/1) | SETSV | -1.27 | -0.74 | 12490194 |
Pdlim5-(1/1) | DITSL | -0.24 | -0.15 | 10359609 |
Erbin-(1/1) | LDVPV | 0.99 | 0.61 | 10878805 |
Magi-2-(5/6) | KESSL | 1.76 | 0.19 | 10681527 |
MUPP1-(10/13) | IATLV | 1.00 | 0.46 | 11000240 |
MUPP1-(10/13) | GKDYV | 1.00 | 1.68 | 11689568 |
NHERF-1-(1/2) | FDTPL | 1.06 | 0.01 | 10980202 |
LIN-7A-(1/1) | IESDV | 0.33 | 0.29 | 10341223 |
Lin7c-(1/1) | IESDV | 0.33 | 1.00 | 10341223 |
ZO-3-(1/3) | GKDYV | 0.99 | 0.09 | 10601346 |
a1-syntrophin-(1/1) | VLSSV | -1.47 | 0.16 | 11571312 |
PSD95-(1/3) | LQTEV | 0.38 | 1.41 | 11937501 |
PSD95-(1/3) | NETVV | -1.35 | 1.19 | 12067714 |
PSD95-(1/3) | GETAV | -1.32 | 1.23 | 12067714 |
PSD95-(1/3) | EESSV | -2.23 | 0.77 | 11134026 |
PSD95-(1/3) | RTTPV | 1.00 | 0.61 | 12359873 |