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Table 2 List of sequenced genes and promoters available in the mtu_broad dataset.

From: GWAMAR: Genome-wide assessment of mutations associated with drug resistance in bacteria

gene id

gene name

description

promoter sequenced?

Rv0005

gyrB

DNA gyrase subunit B

yes

Rv0006

gyrA

DNA gyrase subunit A

yes

Rv0341

iniB

isoniazid inductible gene protein

yes

Rv0342

iniA

isoniazid inductible gene protein

yes

Rv0343

iniC

isoniazid inductible gene protein

yes

Rv0667

rpoB

DNA-directed RNA polymerase beta chain

yes

Rv0682

rpsL

30S ribosomal protein S12

yes

Rv1483

fabG1

3-oxoacyl-[acyl-carrier protein] reductase

yes

Rv1484

inhA

NADH-dependent enoyl-[acyl-carrier-protein] reductase

yes

Rv1694

tlyA

cytotoxin--haemolysin

no

Rv1854c

ndh

NADH dehydrogenase

yes

Rv1908c

katG

catalase-peroxidase-peroxynitritase T

no

Rv2043c

pncA

pyrazinamidase/nicotinamidas

yes

Rv2245

kasA

3-oxoacyl-[acyl-carrier protein] synthase 1

no

Rv2427Ac

oxyR'

hypothetical protein

no

Rv2428

ahpC

alkyl hydroperoxide reductase C protein

yes

Rv2764c

thyA

thymidylate synthase

yes

Rv2764c

ddl

D-alanine-D-alanine ligase ddlA

no

Rv3423c

alr

alanine racemase

no

Rv3793

embC

membrane indolylacetylinositol arabinosyltransferase

yes

Rv3794

embA

membrane indolylacetylinositol arabinosyltransferase

yes

Rv3795

embB

membrane indolylacetylinositol arabinosyltransferase

yes

Rv3854c

ethA

monooxygenase

yes

Rv3919c

gid

glucose-inhibited division protein B

yes

Rvnr01

rrs

ribosomal RNA 16S

no

Rvnr02

rrl

ribosomal RNA 23S

no