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Table 10 Summary of ChIP-seq sequencing datasets.

From: Evaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees

File # of raw reads # of reads after scythe and sickle % of uniquely mapped reads % of multiply mapped reads
Pt_Input 114,312,040 103,734,004 45.04 28.98
IgG_r1 9,649,641 9,439,338 41.63 28.70
IgG_r2 29,580,452 28,238,882 52.56 33.13
Pt_RNA pol II_r1 13,436,432 13,075,907 43.38 13.38
Pt_RNA pol II_r2 19,877,305 15,313,223 61.69 27.72
ARK1_3738_r1 25,221,831 22,778,470 42.05 21.69
ARK1_3738_r2 75,397,188 67,680,143 53.61 25.47
ARK1_3940_r1 47,192,418 36,767,421 12.50 11.28
ARK1_3940_r2 30,058,970 27,579,626 36.06 32.72