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Table 2 Comparison of short sequencing reads cross species mapping efficiency.

From: Evaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees

File

% of uniquely mapping reads

% of multiply mapping reads

% of unmapped reads

Pt_input

45.04

28.98

25.98

Aspen_input

29.79

24.41

45.8

Pt_RNA pol II_r1

43.38

13.38

43.24

Pt_RNA pol II_r2

61.69

27.72

10.59

Aspen_RNA pol II

29.44

22.20

48.36

Pt_RNA-seq

46.51

45.60

7.89

Aspen_RNA-seq

51.83

24.82

23.35